Analysis of Phylogenetics and Evolution with R

Paradis, Emmanuel

Springer（2006/09発売）

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製本 Paperback:紙装版/ペーパーバック版／ページ数 216 p.／サイズ 50 illus.
言語 ENG
商品コード 9780387329147

基本説明

Integrates a wide variety of data analysis methods into a single and flexible interface: the R language. Gives examples from real biological problems with an emphasis on how things work in an R package.

Full Description

This book integrates a wide variety of data analysis methods into a single and flexible interface: the R language. The book starts with a presentation of different R packages and gives a short introduction to R for phylogeneticists unfamiliar with this language. The basic phylogenetic topics are covered. The chapter on tree drawing uses R's powerful graphical environment. A section deals with the analysis of diversification with phylogenies, one of the author's favorite research topics. The last chapter is devoted to the development of phylogenetic methods with R and interfaces with other languages (C and C++). Some exercises conclude these chapters.

Introduction.- First Steps in R for Phylogeneticists.- Phylogenetic Data in R.- Plotting Phylogenies.- Phylogeny Estimation.- Analysis of Macroevolution with Phylogenies.- Developing and Implementing Phylogenetic Methods in R.