Full Description
This book provides an overview of the history of integrative bioinformatics and the actual situation and the relevant tools. Subjects cover the essential topics, basic introductions, and latest developments; biological data integration and manipulation; modeling and simulation of networks; as well as a number of applications of integrative bioinformatics. It aims to provide basic introduction of biological information systems and guidance for the computational analysis of systems biology. This book covers a range of issues and methods that unveil a multitude of omics data integration and relevance that integrative bioinformatics has today. It contains a unique compilation of invited and selected articles from the Journal of Integrative Bioinformatics (JIB) and annual meetings of the International Symposium on Integrative Bioinformatics.
Contents
Chapter 1. Integrative Bioinformatics: History and Perspective.- Chapter 2. From Genotypes to Phenotypes - A Plant Perspective on Current Developments in Data Management and Data Publication.- Chapter 3. Research data resources for epidemiology.- Chapter 4. Data Warehousing of Life Science Data.- Chapter 5. Automation in Graph-Based Data Integration and Mapping.- Chapter 6. DaTo: an Integrative Web Portal for Biological Databases and Tools.- Chapter 7. The Use of Data Integration and Knowledge Graphs in Modern Molecular Plant Breeding.- Chapter 8. Integrative data analysis and exploratory data mining in biological knowledge graphs.- Chapter 9. Exploring plant transcription factor regulatory networks.- Chapter 10. Microbiome and big-data mining.- Chapter 11. Data Integration Applications in Medical Information Systems.- Chapter 12. Visualising Metabolic Pathways and Networks: Past,Present,Future.- Chapter 13. Comprehensive open-source Petri net toolchain for modeling and simulation in systems biology.- Chapter 14. Immersive Exploration of Cell Localization Scenarios using VR, Spatialized Video Communication and Integrative Bioinformatics.- Chapter 15. IoS: a Needed Platform for Scientific Workflow Management.- Chapter 16. Revealing genotype-phenotype interactions: The AgroLD experience and challenges.- Chapter 17. Interactive Data Analyses Using Tbtools.- Chapter 18. Analyzing multi-omic data with integrative platforms.
