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Full Description
This new volume provides an up-to-date understanding of the numerous classes of plant transposable elements, the mobile units of DNA that comprise large portions of plant genomes, which are an important contributor for gene and genome evolution. Transposable elements (TEs) are major components of large plant genomes and main drivers of genome evolution, known to produce a wide variety of changes in plant gene expression and function.
Providing a systematic interpretation of protocols designed to characterize TEs and their biotechnological roles, the volume explores TEs in plant development, their architecture, their epigenetic regulation, their use in DNA repair, their evolution and speciation, while also highlighting their importance in the approaching epoch of climate change.
The volume begins with introduction of transposable elements, covering their classification and transposition. It delves into protocols designed to characterize TEs and their biotechnological applications. The book includes computational approaches for prediction and analysis, retro-transposon capture sequencing, and more. The section on transposon biology focuses on its role in plant development and as natural genetic engineers of genome mutation, evolution, and speciation. The book looks further into transposon applications in genome editing, exploring tagging and mutagenesis, genome engineering, and more.
Contents
PART I: INTRODUCTION OF TRANSPOSABLE ELEMENTS (TEs) 1. Introduction, Classification, and Transposition of Transposable Elements (TEs) 2. DNA Transposons PART II: PROTOCOLS DESIGNED TO CHARACTERIZE TEs AND BIOTECHNOLOGICAL APPLICATIONS 3. Computational Approaches for Prediction and Analysis of Transposable Elements in Plants 4. Annotation of Transposable Elements in the Evolution of Plant Genome Biology 5. Retro Transposon Capture Sequencing (RC-Seq) PART III: TRANSPOSON BIOLOGY 6. Transposable Elements and Plant Development 7. Transposons as Natural Genetic Engineers of Genome Mutation, Evolution, and Speciation 8. Transposable Elements and Epigenetic Regulation 9. Transposable Elements and Polyploidy in Plants 10. Transposable Elements and Plant Architecture 11. Regulation of Transposable Elements in Plant Genome 12. Transposable Elements and DNA Repair at the Cellular Level PART IV: TRANSPOSON APPLICATIONS IN GENOME EDITING 13. Role of Transposable Elements in Plants under Abiotic Stress Response 14. Genome Engineering in Plants via Transposable Elements 15. Transposon Tagging and Mutagenesis PART V: TEs OF MODEL PLANT 16. Classification, Structure, Function, and Evolution of Transposable Elements in Oryza sativa
