Full Description
Deep Learning in Bioinformatics: Techniques and Applications in Practice, Second Edition introduces the topic in an easy-to-understand way, exploring how it can be utilized for addressing important problems in bioinformatics, including drug discovery, de novo molecular design, sequence analysis, protein structure prediction, gene expression regulation, protein classification, biomedical image processing and diagnosis, biomolecule interaction prediction, and in systems biology. The book also presents theoretical and practical successes of deep learning in bioinformatics, pointing out problems and suggesting future research directions. The Second Edition includes several new chapters, and the applications and examples have been updated for new Deep Learning advances and techniques throughout. Dr. Izadkhah provides valuable insights and will help researchers use deep learning techniques in their biological and bioinformatics studies.
Contents
1. Why Life Science?
2. A Review of Machine Learning
3. An Introduction to the Python Ecosystem for Deep Learning
4. Preprocessing Techniques for Bioinformatics Data
5. Foundations of Neural Networks and Deep Learning
6. Convolutional Neural Networks in Biology and Bioinformatics
7. Recurrent Neural Networks: Generating New Molecules and Proteins Sequence Classification
8. Sequence-Based Analysis and Neural Networks
9. Graph Neural Networks for Bioinformatics
10. Transfer Learning in Bioinformatics: Adapting Pre-Trained Models
11. Pathway-Based Neural Networks for Biological Insights
12. Multi-Omics Integration Using Multi-Input Neural Networks
13. Deep Learning for Genomic and Metabolomics Data Analysis
14. Autoencoders and Deep Generative Models in Bioinformatics
15. Interpretable Neural Networks for Understanding Decisions in Biological Processes
16. Applications of Deep Learning in Personalized Medicine
17. Ethical Considerations and Challenges in Deep Learning for Bioinformatics
